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GCAAACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCAGGGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGgtgagggaggccatgaaagcttacagctttgattagattattggataaagcttggaaatttatattattgtattggactataactgctgtgactctttga...
species | Oryza sativa |
transcript | LOC_Os07g47290.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAG GGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAAEST: gi|29625366|gb|CB630377.1|CB630377
genomic: GGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGgtgagggagg ... tgcactgcagGGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAA
EST: GGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAG GGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAA
genomic: GGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGgtgagggagg ... tgcactgcagGGTCCAAGCAGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCAGGGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGgtgagggaggccatgaaagcttacagctttgattagattattggataaagcttggaaatttatattattgtattggactataactgctgtgactctttga
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