1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAATGTATGTGGCAAACCGTGCGTCGGACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatctatattagggactttactcctttttcatgttgtctcattgtactgtggccataagatattgggaaatcacgagcttcctattcatcaagtt...
species | Oryza sativa |
transcript | LOC_Os02g53060.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCT GCTGCTGATACACAAGTAATTTCCEST: gi|88584075|gb|CI701601.1|CI701601
genomic: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatct ... tgtctcacagGCTGCTGATACACAAGTAGTTTCC
EST: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCT GCTGCTGATACACAAGTAEST: gi|66924564|gb|CX111412.1|CX111412
genomic: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatct ... tgtctcacagGCTGCTGATACACAAGTA
EST: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCT GCTGCTGATACACAAGTAATTTCCEST: gi|163920296|gb|EG710592.1|EG710592
genomic: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatct ... tgtctcacagGCTGCTGATACACAAGTAGTTTCC
EST: ACAAGATTACTCAGCTAACCGACAATGTGTACATCTGCCGCTCTGGATCT GCTGCTGATACACAAEST: gi|88338208|gb|CI633327.1|CI633327
genomic: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatct ... tgtctcacagGCTGCTGATACACAA
EST: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCT GCTGCTGATACACAAGTAATTTCC
genomic: ACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatct ... tgtctcacagGCTGCTGATACACAAGTAGTTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATGTATGTGGCAAACCGTGCGTCGGACAAGATTACTCAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTgtaagtatctatattagggactttactcctttttcatgttgtctcattgtactgtggccataagatattgggaaatcacgagcttcctattcatcaagtt
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