Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29664246|gb|CB660521.1|CB660521EST: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAG GCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
genomic: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacat ... acgattgcagGCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
EST:
gi|29671647|gb|CB667922.1|CB667922EST: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAG GCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
genomic: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacat ... acgattgcagGCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
EST:
gi|58693917|gb|CK082604.1|CK082604EST: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAG GCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
genomic: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacat ... acgattgcagGCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
EST:
gi|8956961|gb|BE230764.1|BE230764EST: TC-ATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAG GCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
genomic: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacat ... acgattgcagGCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
EST:
gi|58687089|gb|CK075776.1|CK075776EST: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAG GCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
genomic: TCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacat ... acgattgcagGCTGGCCGGCGTGGCGCTGGTCGTGCCGGCGGTGAACTACTGGTGGCCGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCTCGCCGACAAGCTGCAGCTCGGGGAGAAGTTCTATGTGGTTGGGACTTCCATGGGCGGCTACGTTGCGTGGAGCTGCCTCAACTACATCCCTTACAGgtcaaaacatatgcatcacagcatcagttcatctgatcggtcttttctttttcagtatctgatgagaggttggacgattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC