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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcatagatttaaattgtttttactctccccaaaccaccctgaaatgatagaaattgttactctcttctttctcgtttctcttttattaaatttggcttgtgtgatctatttaatgatttgcag

Basic information

species Glycine max
transcript GLYMA14G02530.2
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23732448|gb|BU764383.1|BU764383
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|192298820|gb|FG991041.1|FG991041
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCGGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|17518632|gb|BM187674.1|BM187674
EST:     GATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|21602714|gb|BQ613045.1|BQ613045
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|7924247|gb|AW830273.1|AW830273
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|192326942|gb|FK019219.1|FK019219
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|209710455|gb|BW657327.1|BW657327
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
EST: gi|209703723|gb|BW670686.1|BW670686
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACG
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACG
EST: gi|4288001|gb|AI441270.1|AI441270
EST:     GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAG                         CTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC
genomic: GTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGgtagtttcat ... tgatttgcagCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATC