1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTACCTCACCTGTTCAATGGGAAACAACAGTGCAGACTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaatatacaaatttaggttcagtttggaaataaaattcaataagcattttatagaagaaaatgaataggtaaagtgaataaaacttttcctacca...
species | Glycine max |
transcript | GLYMA11G29490.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGGAAG GTTATTGCTGGAATCATCANAAGAACGGACCAAGGTGCTGATATTGAANATEST: gi|8404349|gb|BE059983.1|BE059983
genomic: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaata ... catttttcagGTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAT
EST: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAG GTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAATEST: gi|31463730|gb|CD405758.1|CD405758
genomic: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaata ... catttttcagGTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAT
EST: CTCTTCTAACCAAGGGTCTGAAGACAAGCTATGAACTCGGACCCGGAAAG GTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAAEST: gi|31471689|gb|CD413717.1|CD413717
genomic: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaata ... catttttcagGTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAT
EST: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAG GTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAT
genomic: CTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaata ... catttttcagGTTATTGCTGGAATCATCAAAAGAACGGACAAAGGTGCTGATATTGAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTACCTCACCTGTTCAATGGGAAACAACAGTGCAGACTCTTCTAACCAAGGGTCTGAAGAAAAGCTATGAACTCGGACCCGGAAAGgtaataaatatacaaatttaggttcagtttggaaataaaattcaataagcattttatagaagaaaatgaataggtaaagtgaataaaacttttcctacca
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaataaaa