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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAGCAGAGCAGATAGCTGTGAACAAGCCGGAGGTACCCTTTGGGGCTCAATTAAAACAGTACAATGGACCTCAATGTTTTGTTATTCCTGGAAACCATGgttagttttagctcctggatcaagccttaccaaattaaatgtgctatttttcacggagttcattaaataacctgtttccccctttttgcatttatcatct...

Basic information

species Glycine max
transcript GLYMA14G08860.1
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G08860.1 (Glycine max), 5'ss of exon 8
lower sequence: Vv18s0001g11060.t01 (Vitis vinifera), 5'ss of exon 9
AAAGCAGAGCAGATAGCTGTGAACAAGCCGGAGGTACCCTTTGGGG---CTCAATTAAAACAGTACAATGGACCTCAATGTTTTGTTATTCCTGGAAACCATGgttagttttagctcctggatcaagccttaccaaattaaatgtgctatttttcacggagttcattaaataacctgtttccccctttt-tgcatttatcatct---
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---GTAGAGCACATAGCTGTAAACAAGCCAGAGGTACCTTGTGGGCTGTCTGAACTGAAGCAATATGAGGGGCCTCAGTGTTTTGTTATTCCTGGAAACCATGgtttgtcttagttcctagcctgagcttcctc---tggaaagttttttcacctgcaaaaag-agaagataactgcttgggctcaaatatgtttctggcattttta