1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTGTGAACCATTTGACACCTACCCGAGAACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttctcctttcgttgctcttctatctttttatgggtaattttgtgtttgtgttgataaaaacaaaaaatgagtagtgtattgaaaatatgtcag...
species | Glycine max |
transcript | GLYMA14G07190.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ACCTATGATTTACTGCATGCTGCATACCTGCTTTCTGTTGAGAAGAAAAG ATGCACTTTGTCATCAATTATGCTCGAGATGGATCGGATACTAATGCCCGGEST: gi|298173382|gb|HO016718.1|HO016718
genomic: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttc ... ctcttgtcagATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGG
EST: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAG ATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGGEST: gi|27424531|gb|CA936051.1|CA936051
genomic: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttc ... ctcttgtcagATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGG
EST: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAG ATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGGEST: gi|10709766|gb|BF009490.1|BF009490
genomic: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttc ... ctcttgtcagATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGG
EST: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAG ATGCAATTTGTCATCAATAATGCTTGAGATGGATCGGATACTAAGGCCCGG
genomic: ACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttc ... ctcttgtcagATGCAATTTGTCATCAATTATGCTTGAGATGGATCGGATACTAAGGCCCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTGAACCATTTGACACCTACCCGAGAACCTATGATTTACTGCATGCTGCAAACCTGCTTTCTGTTGAGAAGAAAAGgtaccttttctcctttcgttgctcttctatctttttatgggtaattttgtgtttgtgttgataaaaacaaaaaatgagtagtgtattgaaaatatgtcag
- - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaacaaaa