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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCTTGGATGACCGTTCTCGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAGgtatcttttcctgctgtttgtttcttacatgtttagtttttccacatgttactaagagcttgtaccttttctcag

Basic information

species Glycine max
transcript GLYMA01G01390.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7285515|gb|AW598002.1|AW598002
EST:     GTGATGAGCGCCTAGTTGCTGTTACTGGAAA-GTACCAAAAATCTCAGAG                         GAATCGAGTGTTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGA
genomic: GTGATAAGCGCCTAGTTGCT-TTACTGGAAAAGTACCACAAATCTCAGAGgtatcttttc ... cttttctcagGAATCGAGTATTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGA
EST: gi|6915515|gb|AW397045.1|AW397045
EST:     CGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAG                         GAATCGAGTATTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGAGTTGA
genomic: CGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAGgtatcttttc ... cttttctcagGAATCGAGTATTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGAGTTGA
EST: gi|207788016|gb|GD759700.1|GD759700
EST:     CGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAG                         GTAATCGAGTATTGGTTTT-GTTTTGTACAAATTGGAAGCCAAACGAGTTG
genomic: CGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAGgtatcttttc ... cttttctcagG-AATCGAGTATTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGAGTTG