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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGAGAAAGAAAAGGTTGCAGCGCAGCAAGCACAATGGGAGCATCCAAACCACGGAGTTAATGCATCTTTCTTGCTACCGCAGCCACTTTTGAACATGGGgtgacctttcaataacaagatattataattatgttacatcttcgttatagtacgttcatatatattttaactgggattatttttctctattagtaaatgatagtttaatattgtttttgcag

Basic information

species Glycine max
transcript GLYMA16G13070.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8403946|gb|BE059580.1|BE059580
EST:     CACGGAGTTAATGCATCTTTCTTGCTACCGCAGCCACTTTTGAACATGGG                         TGGCAATTACCGTGAGGAAGCATCAGAAGTAGGGAGGAATGAACTTGACCT
genomic: CACGGAGTTAATGCATCTTTCTTGCTACCGCAGCCACTTTTGAACATGGGgtgacctttc ... gtttttgcagTGGCAATTACCGTGAGGAAGCATCAGAAGTAGGGAGGAATGAACTTGACCT
EST: gi|31476562|gb|CD418590.1|CD418590
EST:     CCCGGAGTTAATGCATCTTTCTTGCTACCGCAGCCACTTTTGAACATGGG                         TGGCAATTACCGTGAGGAAGCATCAGAAGTAGGGAGGAATGAACTTGACCT
genomic: CACGGAGTTAATGCATCTTTCTTGCTACCGCAGCCACTTTTGAACATGGGgtgacctttc ... gtttttgcagTGGCAATTACCGTGAGGAAGCATCAGAAGTAGGGAGGAATGAACTTGACCT