1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAGGTTAACCGTGAGTGCAATGGGAATTTTTATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaactataacattactggcaacaaatgtgcttaagtgaatttggaactaattgatgattcttgctgttttttag
species | Glycine max |
transcript | GLYMA16G09320.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAG TTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGCEST: gi|57574399|gb|CX547374.1|CX547374
genomic: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaac ... tgttttttagTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
EST: CAAAAGTTGATGAG TTGGTTGATGAGATAAACATATATACCATTCTAGAACCATGCTATCACGGCEST: gi|7589867|gb|AW705632.1|AW705632
genomic: CAAAAGTTGATGAGgtgatttaac ... tgttttttagTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
EST: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAG TTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGCEST: gi|5606148|gb|AI900246.1|AI900246
genomic: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaac ... tgttttttagTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
EST: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAG TTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGCEST: gi|57574752|gb|CX547727.1|CX547727
genomic: ATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaac ... tgttttttagTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
EST: TCTAGCAAGCTTTCAAAAGTTGATGAG TTGGGTGTTGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
genomic: TCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaac ... tgttttttagTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGTTAACCGTGAGTGCAATGGGAATTTTTATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGgtgatttaactataacattactggcaacaaatgtgcttaagtgaatttggaactaattgatgattcttgctgttttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT