1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGTTGCATCCATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAGgtgggtatctgattagaaagctaatgatttgtgattttcctttatatggttgatatttatttcgcataggtatttataaattatgtatttatattgaggt...
species | Glycine max |
transcript | GLYMA13G20980.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAG ACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGEST: gi|5760794|gb|AI966157.1|AI966157
genomic: ATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAGgtgggtatct ... caactgacagACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGG
EST: ATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAG ACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGCCTTGTTCTGGTCC
genomic: ATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAGgtgggtatct ... caactgacagACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGCCTTGTTCTGGTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGTTGCATCCATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAGgtgggtatctgattagaaagctaatgatttgtgattttcctttatatggttgatatttatttcgcataggtatttataaattatgtatttatattgaggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA