1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GTCATCAGCGGTCACTTGGGATGGGTGAGATCTGTTGCAGTTGATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatcacaaaatgcatgtcatagttgcttgttatgaaaaggcatatttataagaacaaaaatttagttggccatgttgaactgttgattctatgg...
species | Glycine max |
transcript | GLYMA09G04910.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAG ATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAEST: gi|193543318|gb|FK502497.1|FK502497
genomic: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatc ... ctttgggcagATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTA
EST: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAG ATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATTEST: gi|208247692|gb|GE045276.1|GE045276
genomic: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatc ... ctttgggcagATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATT
EST: TCCCAGTAACACATGGTTTTTGTACTGGTTCTGCAGATCGAACTATCAAG ATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATTEST: gi|254313963|gb|GR831592.1|GR831592
genomic: TCCCAGTAACACATGG-TTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatc ... ctttgggcagATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATT
EST: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAG ATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATTEST: gi|208049582|gb|GD849367.1|GD849367
genomic: ATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatc ... ctttgggcagATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATT
EST: TGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAG ATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATT
genomic: TGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatc ... ctttgggcagATATGGGACTTGGCAAGTGGAGTATTGAAGCTCACATTAACAGGCCACATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATCAGCGGTCACTTGGGATGGGTGAGATCTGTTGCAGTTGATCCCAGTAACACATGGTTTTGTACTGGTTCTGCAGATCGAACTATCAAGgtatttgatcacaaaatgcatgtcatagttgcttgttatgaaaaggcatatttataagaacaaaaatttagttggccatgttgaactgttgattctatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacaaaaa