1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GACTTAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaagacgtgatatagtattcttttttattgccattattaaaatttttgcaaataagtatctagttcaactaccaccatcctcagtctctaagg...
species | Glycine max |
transcript | GLYMA09G03470.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGEST: gi|18038899|gb|BM307193.1|BM307193
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTG
EST: ATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGEST: gi|9563850|gb|BE473359.1|BE473359
genomic: ATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTG
EST: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGEST: gi|193499843|gb|FK464760.1|FK464760
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTG
EST: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGEST: gi|192330929|gb|FK023102.1|FK023102
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAG
EST: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGEST: gi|192312081|gb|FK003858.1|FK003858
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTG
EST: TAGCAAATGTGGTTCCAAATCTTGACGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGEST: gi|193356410|gb|FK323123.1|FK323123
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTG
EST: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCT AGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCG
genomic: TAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaa ... tgtattccagAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACTTAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTgtaagtgcaagacgtgatatagtattcttttttattgccattattaaaatttttgcaaataagtatctagttcaactaccaccatcctcagtctctaagg
- - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - CAGCTG