1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATCCCGGAGTTGAAGAGATGGGATATGGCAGGAATCCAGCTCAAACTCATGGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactcactgctaattgactcaatcattgatcactttacagttgacaactgttaattactcttgtaaactgtatcaaatggttaattcactattca...
species | Glycine max |
transcript | GLYMA08G11120.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|208156267|gb|GD952853.1|GD952853
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|207808882|gb|GD780776.1|GD780776
genomic: GTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: TGTAAGTCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193473225|gb|FK436744.1|FK436744
genomic: TG-AAG-CCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|207726141|gb|GD704229.1|GD704229
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|207737439|gb|GD714097.1|GD714097
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|208164027|gb|GD962351.1|GD962351
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCGTGAGCAAEST: gi|193304852|gb|FK271735.1|FK271735
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCTA
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGC-A
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCCGGAGTTGAAGAGATGGGATATGGCAGGAATCCAGCTCAAACTCATGGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactcactgctaattgactcaatcattgatcactttacagttgacaactgttaattactcttgtaaactgtatcaaatggttaattcactattca
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC