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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGAACTCAATATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatgcttcattggagttaatataaataccagtacttgattccctgattgtggatacctgtcaattctgtgcag

Basic information

species Glycine max
transcript GLYMA07G36720.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254346701|gb|GR856423.1|GR856423
EST:     TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAG                         ACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
genomic: TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatg ... ttctgtgcagACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
EST: gi|208259863|gb|GE059305.1|GE059305
EST:     GATTCTGTGCTTCATAAAATTCGTGATACGTCAGAG                         ACTGTCCAAACTTTTGTAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
genomic: GATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatg ... ttctgtgcagACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
EST: gi|192312334|gb|FK005338.1|FK005338
EST:     TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAG                         ACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
genomic: TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatg ... ttctgtgcagACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
EST: gi|254346702|gb|GR856424.1|GR856424
EST:     TTCTGTGC-TCGTAAAATTCGTGATACGTCAGAG                         ACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
genomic: TTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatg ... ttctgtgcagACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
EST: gi|51337572|gb|CO981438.1|CO981438
EST:     TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAG                         ACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA
genomic: TATATGCCCGTGTGGATTCTGTGCTTCGTAAAATTCGTGATACGTCAGAGgtaattcatg ... ttctgtgcagACTGTCCAAACTTTTGCAGCAGAGTATCTGAAAACTCCCCTTGGTGAACCA