1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CTATCGAGCACCAGAACTCATATTTGGGGCCACAGAGTATACAAGTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGgtttgtgtcattgatgtgttttcattaattattgttactacaattctattatataaattttccacaaaatgatgtaaatgttctgttgattatctggcacccatgtgttatctaaaacaaattgaacttttgcag
species | Glycine max |
transcript | GLYMA04G06760.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAG CCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTTGTACATATTATAAAGEST: gi|13252463|gb|BG363374.1|BG363374
genomic: TTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGgtttgtgtca ... acttttgcagCCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTTGTACATATTATAAAG
EST: TTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAG CCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTTGTACATATTATAAAG
genomic: TTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGgtttgtgtca ... acttttgcagCCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTTGTACATATTATAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATCGAGCACCAGAACTCATATTTGGGGCCACAGAGTATACAAGTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGgtttgtgtcattgatgtgttttcattaattattgttactacaattctattatataaattttccacaaaatgatgtaaatgttctgttgattatctggcacccatgtgttatctaaaacaaattgaacttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG