1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATGTGATCCAGTGATGGGTGATGAAGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaagtgaactattctatgccttcacctataattgaagattatattttattgcttagttaacagggtcctatttttataggatgatacaggcatacttcccttttgtgtatcctatttttatttgagaagtatattcctagtgttagcatctgagtaacacacattttggcagg
species | Glycine max |
transcript | GLYMA18G04360.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGCTGACTCCCAACCAGTTTGAAGCAGAACTACEST: gi|22929873|gb|BU547012.1|BU547012
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
EST: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTACEST: gi|298186757|gb|HO037390.1|HO037390
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
EST: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTEST: gi|213600856|gb|DB958434.1|DB958434
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGT
EST: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTACEST: gi|7684914|gb|AW755562.1|AW755562
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
EST: AGGAGAGCTNTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCCACCAGTTTGAAGCAGAACTACEST: gi|27423806|gb|CA935326.1|CA935326
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
EST: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAEST: gi|22541669|gb|BU091512.1|BU091512
genomic: AGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTA
EST: CTCAAGAGCTAGTATCAGTCTATCGTGAGAAGG TTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
genomic: CTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaa ... ttttggcaggTTGTTCCAGTAGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGATCCAGTGATGGGTGATGAAGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGtatgactgaagtgaactattctatgccttcacctataattgaagattatattttattgcttagttaacagggtcctatttttataggatgatacaggcatacttcccttttgtgtatcctatttttatttgagaagtatattcctagtgttagcatctgagtaacacacattttggcagg
- - - - - - - - - - - - - - - - - - - - - - AGAGCT