1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAAGATTGTTTGGATGACTTAAGCTATGCAATAATGTACGAGACAACCAAGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctaccattgctcctattttacgcagtttgtttgctctgctaattcaatgtgaaaaatggaatttggcttttgcatgcatgatatgttagattaatt...
species | Glycine max |
transcript | GLYMA16G10360.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAG TTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAEST: gi|17402137|gb|BM178919.1|BM178919
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAA
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAG TTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAEST: gi|58022276|gb|CX709017.1|CX709017
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAA
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAG TTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAEST: gi|58022560|gb|CX709301.1|CX709301
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAA
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAG TTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAEST: gi|7478537|gb|AW666305.1|AW666305
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAA
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAG TTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAEST: gi|6667589|gb|AW279040.1|AW279040
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAA
EST: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTGATCAG TTGAAATCTTCACTCCTGCTGCACGTAGATGGAACAAGTCCAAG-AGCTGA
genomic: AGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctacca ... ttttttacagTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCA-GTAGCTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGATTGTTTGGATGACTTAAGCTATGCAATAATGTACGAGACAACCAAGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGgtgtctaccattgctcctattttacgcagtttgtttgctctgctaattcaatgtgaaaaatggaatttggcttttgcatgcatgatatgttagattaatt
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