1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTCTTCTCTTCTGCAAGACCACTTTCCTAATTGTCTTGGTTGCATGTTTGTCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGgtaagttatcctttcagcttattcagcctaaaatgactaagaaagtggcaagagaaggtgcatcgggttggttatcatgaaacatgtaggggtatcaaac...
species | Glycine max |
transcript | GLYMA15G04480.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAG ACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTATEST: gi|14259893|gb|BG882801.1|BG882801
genomic: TCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGgtaagttatc ... tctgtgtcagACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTAT
EST: TCATACGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAG ACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTATEST: gi|7639077|gb|AW733407.1|AW733407
genomic: TCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGgtaagttatc ... tctgtgtcagACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTAT
EST: TCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAG ACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTAT
genomic: TCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGgtaagttatc ... tctgtgtcagACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTTCTCTTCTGCAAGACCACTTTCCTAATTGTCTTGGTTGCATGTTTGTCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGgtaagttatcctttcagcttattcagcctaaaatgactaagaaagtggcaagagaaggtgcatcgggttggttatcatgaaacatgtaggggtatcaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gggttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtagggg