1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGgtattctttcctattttattcctttatttgaatcagcctatatatttcttccatcaccatttcattttccttatattggttgttgctacaagttttatga...
species | Glycine max |
transcript | GLYMA13G36410.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAG GAATGTATCAATCGCATCACATCTCTGGAAAGTATGGEST: gi|193365348|gb|FK329755.1|FK329755
genomic: AATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGgtattctttc ... actgatgcagGAATGTATCAATCGCATCACATCTCTGGAAAGTATGG
EST: GAATTTAAATTGCGTACACAG GAATGTATCAATCGCATCACATCTCTGGAAAGTATGGEST: gi|51335568|gb|CO979434.1|CO979434
genomic: GAATTTAAATTGCGTACACAGgtattctttc ... actgatgcagGAATGTATCAATCGCATCACATCTCTGGAAAGTATGG
EST: AATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAG GAATGTATCAATCGCATCACATCTCTGGAAAGTATGGEST: gi|193496266|gb|FK463322.1|FK463322
genomic: AATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGgtattctttc ... actgatgcagGAATGTATCAATCGCATCACATCTCTGGAAAGTATGG
EST: GAAGATCTTGCTGCAGAATTTAAATTGCGTACACAG GAATGTATCAATCGCATCACATCTCTGGAAAGTATGG
genomic: GAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGgtattctttc ... actgatgcagGAATGTATCAATCGCATCACATCTCTGGAAAGTATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGgtattctttcctattttattcctttatttgaatcagcctatatatttcttccatcaccatttcattttccttatattggttgttgctacaagttttatga
- - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - CTGCAG