1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GACCTGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaacatcatatataatatttttaaataataaaaaataagtgtttctctaatatggtgataaaatgtgtagccaaagggataaaacaaaagagt...
species | Glycine max |
transcript | GLYMA05G25320.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|209697835|gb|BW663952.1|BW663952
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|6455727|gb|AW186410.1|AW186410
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|254326866|gb|GR836475.1|GR836475
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|254343632|gb|GR857388.1|GR857388
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|51335099|gb|CO978965.1|CO978965
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTEST: gi|13481254|gb|BG510597.1|BG510597
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
EST: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCT AGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
genomic: TGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaa ... tgtatcccagAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCTGAAAAATGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTTCTgtaagtggaacatcatatataatatttttaaataataaaaaataagtgtttctctaatatggtgataaaatgtgtagccaaagggataaaacaaaagagt
- - - - - - - - - - - - - - - CAGCTG