1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATTTCTGTGAGCATTTTATGGTGGTCAACAAGAAAGCTGGAGATACATCCTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataatttcatttccacttttatatactttacagtaataattatcattttgtattgttgtttctagctagttctctgcctttcgatatattgcctcct...
species | Glycine max |
transcript | GLYMA02G47340.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAG GTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGCEST: gi|254322560|gb|GR837974.1|GR837974
genomic: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataattt ... atggtttcagGTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
EST: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAG GTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGCEST: gi|254328574|gb|GR832946.1|GR832946
genomic: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataattt ... atggtttcagGTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
EST: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAG GTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGCEST: gi|192332567|gb|FK025672.1|FK025672
genomic: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataattt ... atggtttcagGTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
EST: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAG GTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGCEST: gi|254322561|gb|GR837975.1|GR837975
genomic: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataattt ... atggtttcagGTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
EST: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAG GTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
genomic: CTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataattt ... atggtttcagGTCACCTTAGGAATTTCAACGCTTCTTTCATATGTACCTGTTTCACTGGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTCTGTGAGCATTTTATGGTGGTCAACAAGAAAGCTGGAGATACATCCTGCAGTACGATCTGTGATTGGAGGTGCTGTTGGCATGGCAACTCTTCAGgtcataatttcatttccacttttatatactttacagtaataattatcattttgtattgttgtttctagctagttctctgcctttcgatatattgcctcct
- - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT