1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TATTGACAAAACCTTCTTTGAGTGGGATTCCTTTGCTTGTTCTTGGAAACAAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCTgtgagttctagaaatcaatattgccttatatcatcttcttttttttattattgaaatttgtcttgatgctttatgattttctccttgggtgatttcag
species | Glycine max |
transcript | GLYMA14G39540.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCT AGGACTTGAGTCAATTAAAGAEST: gi|7588810|gb|AW704597.1|AW704597
genomic: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCTgtgagttcta ... gtgatttcagAGGACTTGAGTCAATTAAAGA
EST: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCT AGGACTTGAGTCAATTAAAGACAGAGAGGTCTGCTGCTATATGATTTCATGEST: gi|7588811|gb|AW704598.1|AW704598
genomic: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCTgtgagttcta ... gtgatttcagAGGACTTGAGTCAATTAAAGACAGAGAGGTCTGCTGCTATATGATTTCATG
EST: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCT AGGACTTGAGTCAATTAAAGACAGAGAGGTCTGCTGCTATATGATTTCATG
genomic: AAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCTgtgagttcta ... gtgatttcagAGGACTTGAGTCAATTAAAGACAGAGAGGTCTGCTGCTATATGATTTCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTGACAAAACCTTCTTTGAGTGGGATTCCTTTGCTTGTTCTTGGAAACAAAATTGACAAGTCAGAAGCTCTTTCTAAGCAAGCATTGGTAGATCAGCTgtgagttctagaaatcaatattgccttatatcatcttcttttttttattattgaaatttgtcttgatgctttatgattttctccttgggtgatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT