1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgattgtctatgactaattattatgaggttgtaaaactgtgaaatctgcattctgaaaattttccataggtttttttacactcctgataatattt...
species | Glycine max |
transcript | GLYMA11G08350.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTEST: gi|151408017|gb|EV277832.1|EV277832
genomic: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
EST: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTEST: gi|151401299|gb|EV271113.1|EV271113
genomic: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
EST: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTEST: gi|209711275|gb|BW665327.1|BW665327
genomic: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
EST: GACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTEST: gi|14196069|gb|BE657919.2|BE657919
genomic: GACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
EST: TTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTEST: gi|57574227|gb|CX547202.1|CX547202
genomic: TTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
EST: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCAT GCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
genomic: AGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgatt ... cttattttagGCAATAGAAACTGGGGTAGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATgtgagtgattgtctatgactaattattatgaggttgtaaaactgtgaaatctgcattctgaaaattttccataggtttttttacactcctgataatattt
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