1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AGATGCAGAATGGGCTTTGCTAATAGGTGCAAAACCTCGAGGACCTGGAATGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgataatcagatttaaatcatatttattgctttccgctaaagtgtagttaattatactgacattataccttttgtacaacag
species | Glycine max |
transcript | GLYMA10G34150.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|10236029|gb|BE804977.1|BE804977
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|151394825|gb|EV264696.1|EV264696
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|254344943|gb|GR851426.1|GR851426
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCTTTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|5606819|gb|AI900917.1|AI900917
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCTTTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|151403877|gb|EV273687.1|EV273687
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGCTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTGEST: gi|27426251|gb|CA937771.1|CA937771
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
EST: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAG GGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
genomic: TGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgat ... tgtacaacagGGAAGAGCATTAAATGCCGTTGCATCCCGCAATGTCAAAGTTATAGTAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATGCAGAATGGGCTTTGCTAATAGGTGCAAAACCTCGAGGACCTGGAATGGAACGAGCAGACTTGTTAGACATAAATGGGCAGATTTATGCAGCGCAGgtaaaacgataatcagatttaaatcatatttattgctttccgctaaagtgtagttaattatactgacattataccttttgtacaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT