1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCAATGAAGAATCCAGGGTTGATCAAAAGGGGTTGGTGGTGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataactatattcaatagaccacttcctccctggagcaatccaagatatagtagttactatcatgtcttgtgaaatttttattgtactgaggctgtt...
species | Glycine max |
transcript | GLYMA07G24950.4 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGCEST: gi|192319629|gb|FK013713.1|FK013713
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGCEST: gi|254347325|gb|GR853574.1|GR853574
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGCEST: gi|192301633|gb|FG994369.1|FG994369
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAGTCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGGTGAAAACGACCGCATCATCAGEST: gi|192319630|gb|FK013714.1|FK013714
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGG-TGAAAACGACCGCATCATCAG
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGCEST: gi|151403964|gb|EV273774.1|EV273774
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
EST: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAAT GTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
genomic: TGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataact ... ttttaaacagGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAATGAAGAATCCAGGGTTGATCAAAAGGGGTTGGTGGTGAGATGTTGTATTGTGTAATTCCGTGGAGAATCCAAGAATAATAATAATgtaaataactatattcaatagaccacttcctccctggagcaatccaagatatagtagttactatcatgtcttgtgaaatttttattgtactgaggctgtt
- - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcctcc