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AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGgtacagttcatggttcttttgggctgttaactttattttgtccgagttttttgttgggtgtcccatgaagcttttcagtgttccttgttgttaattatct...
species | Glycine max |
transcript | GLYMA07G03930.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GAGAGGCTATGCGTCAGCCTCAG ATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGAEST: gi|213616567|gb|DB965737.1|DB965737
genomic: GAGATGCTATGCGTCAGCCTCAGgtacagttca ... tatatttcagATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGA
EST: AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAG ATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGAEST: gi|19269403|gb|BM885659.1|BM885659
genomic: AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGgtacagttca ... tatatttcagATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGA
EST: ---TTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAG ATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGAEST: gi|209714755|gb|BW654105.1|BW654105
genomic: AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGgtacagttca ... tatatttcagATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGA
EST: AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAG ATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGA
genomic: AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGgtacagttca ... tatatttcagATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGgtacagttcatggttcttttgggctgttaactttattttgtccgagttttttgttgggtgtcccatgaagcttttcagtgttccttgttgttaattatct
- - - - - - - - - AAGGAG
- - - - - - - - - AGGAGA
- - - - - - - - - - GGAGAT
- - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgggtg