1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttcatttgtcttggttcagtttttcttgcattattcggttacatcctcatcagtttatgtattgcag
species | Glycine max |
transcript | GLYMA05G26240.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGAGAGGATTTTGCGTGCACATAGACTAGCTGCTCAAGCTACAAATGAGA ATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCAEST: gi|151393104|gb|EV262979.1|EV262979
genomic: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttca ... tgtattgcagATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCA
EST: TGAGAGGATTT-GTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGA ATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCAEST: gi|13480594|gb|BG509937.1|BG509937
genomic: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttca ... tgtattgcagATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCA
EST: GAGAGGATTNTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGA ATTCTGCTTCTTCAGTGCAEST: gi|254340891|gb|GR854619.1|GR854619
genomic: GAGAGGATT-TTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttca ... tgtattgcagATTCTGCTTCTTCAGTGCA
EST: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGA ATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCAEST: gi|254346278|gb|GR859891.1|GR859891
genomic: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttca ... tgtattgcagATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCA
EST: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGA ATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCA
genomic: TGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttca ... tgtattgcagATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAgtaagtttcatttgtcttggttcagtttttcttgcattattcggttacatcctcatcagtttatgtattgcag
- - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT