1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGTAGAAACCTTCCTAGATAGTTTGCCAACCATGTTCCAGGACAATGTAAACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGgtatgtcagtctcttttaatccttcaatggtgatttttcttatcaaaatatctgttgctagtttttttttttttccttctttttcaataggcagtgaact...
species | Glycine max |
transcript | GLYMA03G38830.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATG AGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTTEST: gi|6482999|gb|AW202136.1|AW202136
genomic: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGgtatgtcagt ... cactttgcagAGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTT
EST: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATG AGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTTEST: gi|6502377|gb|AW203750.1|AW203750
genomic: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGgtatgtcagt ... cactttgcagAGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTT
EST: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATG AGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTT
genomic: ACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGgtatgtcagt ... cactttgcagAGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTAGAAACCTTCCTAGATAGTTTGCCAACCATGTTCCAGGACAATGTAAACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGgtatgtcagtctcttttaatccttcaatggtgatttttcttatcaaaatatctgttgctagtttttttttttttccttctttttcaataggcagtgaact
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