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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAGgtttgtttctttttacatatttaaataattttaagttaaatatattttataacatcattaattcattgtatcctgatagtgattatgcataatggtagtg...

Basic information

species Glycine max
transcript GLYMA03G16660.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151411475|gb|EV281286.1|EV281286
EST:     GTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAG                         TGGCATGGGTCCCGATTTTCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGC
genomic: GTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAGgtttgtttct ... gttgtttcagTGGCATGGGTCCCGATTTTCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGC
EST: gi|9899371|gb|BE608339.1|BE608339
EST:     GTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAG                         TGGCATGGGTCCCGATTTTCGAGTTTTGGTTCGAAAAAGCANGAAACAAGC
genomic: GTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAGgtttgtttct ... gttgtttcagTGGCATGGGTCCCGATTTTCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGC