1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTGCGTCGTGAAAGAATCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGgttcgtggttttgcaaatgcaattacaatattaacttgtttgcttatattttcagtaaatacacaattttaattttcaattaacttggaaattatcattt...
species | Glycine max |
transcript | GLYMA20G36770.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAG ACGGACAGAGCGGCGATGCTTGATGAAATTGTGGACTATGTGAAGTTCCTTEST: gi|20449248|gb|BQ253372.1|BQ253372
genomic: TCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGgttcgtggtt ... gtggttgtagACGGACAGAGCGGCGATGCTTGATGAAATTGTGGACTATGTGAAGTTCCTT
EST: AGGAATTAGTTCCCAGCATCAATAAG ATGGACAGAGCGGCGATGGTTGATGAAATTGTGGACTATGTGAAGTTCCTT
genomic: AGGAATTAGTTCCCAGCATCAATAAGgttcgtggtt ... gtggttgtagACGGACAGAGCGGCGATGCTTGATGAAATTGTGGACTATGTGAAGTTCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCGTCGTGAAAGAATCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGgttcgtggttttgcaaatgcaattacaatattaacttgtttgcttatattttcagtaaatacacaattttaattttcaattaacttggaaattatcattt
- - - - - - - - - - - AAAGAA