1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGCTGGTGGCGGTGTATTTAAAGGCGAAAATGAGTTGAAGATTCATATCCCATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAGgtatttataaaaacttcaagcattatataaatttccaggtctttcttgaagtcttttaaacttcaaacactcatactcggtgactatttgattgttttta...
species | Glycine max |
transcript | GLYMA16G09430.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAG GCAATGGAAACTCGTCCTGTTATCCCAGATCGAAAACTACTTGCAAGGCTTEST: gi|7796167|gb|AW781564.1|AW781564
genomic: CTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAGgtatttataa ... atctttgcagGCAATGGAAACTCGTCCTGTTATCCCAGATCGAAAACTACTTGCAAGGCTT
EST: CATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAG GCAATGGAAACTCGTCCTGTTATCCCAGATCGAAAACTACTTGCAAGGCTTEST: gi|192298751|gb|FG991002.1|FG991002
genomic: CATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAGgtatttataa ... atctttgcagGCAATGGAAACTCGTCCTGTTATCCCAGATCGAAAACTACTTGCAAGGCTT
EST: CATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAG -CA-TGGAAACTCGTCCTGTTATCCCAGATCGAAA-CTACTTG
genomic: CATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAGgtatttataa ... atctttgcagGCAATGGAAACTCGTCCTGTTATCCCAGATCGAAAACTACTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTGGTGGCGGTGTATTTAAAGGCGAAAATGAGTTGAAGATTCATATCCCATCAGCAAATCTAAATGACATAGCTAACCAAGCGGATGATTTGTTGGAGgtatttataaaaacttcaagcattatataaatttccaggtctttcttgaagtcttttaaacttcaaacactcatactcggtgactatttgattgttttta
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