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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCAACAACCACGACAGAATCATTTGACAAAGATTGGTTCTTAGGATGCACCTTTCTTATCATTGCCACCCTAGCTTGGGCATCCCTATTTGTTTTACAAgtaagtgagacatcaagaagctagaaaaagaaaaaaaaaatgtgctaacttcgatggtgtctctctttctcttgctttttgtgctagctagtgtgtctttttgttggtgtcacacaaataattgacctttgttttattttcttgctattgggcag

Basic information

species Glycine max
transcript GLYMA15G36200.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120532886|gb|EH261019.1|EH261019
EST:     NCTTTCTTATCATTGCCACCCTAGCTTGGGCATCCCTATTTGTTTTACAA                         GCCAAAGCTATTCAGACGTACAAGAATCATCAGCTAAGTCTAACTTCACTT
genomic: -CTTTCTTATCATTGCCACCCTAGCTTGGGCATCCCTATTTGTTTTACAAgtaagtgaga ... tattgggcagGCCAAAGCTATTCAGACGTACAAGAATCATCAGCTAAGTCTAACTTCACTT
EST: gi|120532701|gb|EH260834.1|EH260834
EST:     CTTTCTTATCATTGCCACCCCTAGCTTGGGCATCCCTATTTGTTTTACAA                         GCCAAAGCTATTCAGACGTACAAGAATCATCAGCTAAGTCTAACTTCACTT
genomic: CTTTCTTATCATTGCCACCC-TAGCTTGGGCATCCCTATTTGTTTTACAAgtaagtgaga ... tattgggcagGCCAAAGCTATTCAGACGTACAAGAATCATCAGCTAAGTCTAACTTCACTT