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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGgtaacagctaaatcaacgttttgcaatgatatcttggtcaagattaatactgataagtgattcattttattttttttttctttcttccgactttttttcc...

Basic information

species Glycine max
transcript GLYMA15G17340.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31471798|gb|CD413826.1|CD413826
EST:     GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAG                         GGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
genomic: GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGgtaacagcta ... ttttgcttagGGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
EST: gi|31469454|gb|CD411482.1|CD411482
EST:     GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAG                         GGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
genomic: GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGgtaacagcta ... ttttgcttagGGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
EST: gi|31467141|gb|CD409169.1|CD409169
EST:     GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAG                         GGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
genomic: GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGgtaacagcta ... ttttgcttagGGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
EST: gi|31464497|gb|CD406525.1|CD406525
EST:     GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAG                         GGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT
genomic: GATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGgtaacagcta ... ttttgcttagGGTATATGGCTTTGTGAGCATCGGGATTATCCTACACCGCGTACAGTTGTT