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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGCTAGCAACCCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttatttgaaatagctttttatgtggttgtttttatatcagctgaaatttttgcctaacttattggtcctgcag

Basic information

species Glycine max
transcript GLYMA13G44910.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192315478|gb|FK007796.1|FK007796
EST:     CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCA                         ATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
genomic: CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttat ... ggtcctgcagATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
EST: gi|298173138|gb|HO020122.1|HO020122
EST:     CCACCTACAATTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCA                         ATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
genomic: CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttat ... ggtcctgcagATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
EST: gi|192315477|gb|FK007795.1|FK007795
EST:     CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCA                         ATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
genomic: CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttat ... ggtcctgcagATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
EST: gi|298191541|gb|HO039020.1|HO039020
EST:     CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCA                         ATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
genomic: CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttat ... ggtcctgcagATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
EST: gi|192307602|gb|FG999641.1|FG999641
EST:     CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCA                         ATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA
genomic: CCACCTACAACTGTATCAACACCAAATTCCACGCCTCTAGTTCAACCTCAgtgagtttat ... ggtcctgcagATCTGCAAACAACAATGCATCTGCCACAGATGTCACAACTACAAA