1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TATGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaaccttttgttctctttgcagtttgatactttttttctttaatgttattgcatctgagctcattgtgagtatttcattgccaaacttgtgcca...
species | Glycine max |
transcript | GLYMA10G38350.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|193483665|gb|FK452796.1|FK452796
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|17023174|gb|BM094208.1|BM094208
genomic: TGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|6913335|gb|AW394865.1|AW394865
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298169366|gb|HO020726.1|HO020726
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|31457537|gb|CD399565.1|CD399565
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|192303951|gb|FG993837.1|FG993837
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298187689|gb|HO031646.1|HO031646
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAAGAGCTCCGAGAGCGGAAAATACCCTTTACGATTCGGCGCEST: gi|26045616|gb|CA783150.1|CA783150
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298165196|gb|HO011245.1|HO011245
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|24135619|gb|BU926129.1|BU926129
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|192316457|gb|FK008190.1|FK008190
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|151407894|gb|EV277709.1|EV277709
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|14258684|gb|BG881592.1|BG881592
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|19934747|gb|BQ079777.1|BQ079777
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|18039503|gb|BM307797.1|BM307797
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|192295900|gb|FG990910.1|FG990910
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|208048434|gb|GD847001.1|GD847001
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: GTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298192149|gb|HO036231.1|HO036231
genomic: GTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|16347285|gb|BI972880.1|BI972880
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTCGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCAAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|15814904|gb|BI787179.1|BI787179
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|254315322|gb|GR825131.1|GR825131
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|163926269|gb|EH039164.1|EH039164
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|6482337|gb|AW201604.1|AW201604
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|151403366|gb|EV273176.1|EV273176
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|7042283|gb|AW472177.1|AW472177
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAT ATTACTATGAAAGAGCTGCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298199496|gb|HO042859.1|HO042859
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGGG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|10255441|gb|BE823207.1|BE823207
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298181130|gb|HO022569.1|HO022569
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAAAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|22927456|gb|BU544595.1|BU544595
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTNGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298197722|gb|HO045201.1|HO045201
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298179996|gb|HO025211.1|HO025211
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298198238|gb|HO039777.1|HO039777
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|19935890|gb|BQ080630.1|BQ080630
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298168737|gb|HO009667.1|HO009667
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCGTGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGTGCGGAAAATACCCTTTACAATTCGGCGCEST: gi|298183107|gb|HO028370.1|HO028370
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
EST: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAG ATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
genomic: TGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaac ... aacttatcagATTGCTATGAAGGAGCTCCGAGAGCGGAAAATACCCTTTACAATTCGGCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaaccttttgttctctttgcagtttgatactttttttctttaatgttattgcatctgagctcattgtgagtatttcattgccaaacttgtgcca
- - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - TGGAGG