1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTGTCAGAGACAAGCGGACTGGTAAAACAAAAGGTTATGGATTTGTGAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagttcagatgggcctctcttttaagtattactctgtaatgtctaaatacatattgactattactctgcaatatctgttactcttctgactagt...
species | Glycine max |
transcript | GLYMA10G30900.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGEST: gi|208150188|gb|GD950247.1|GD950247
genomic: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
EST: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGEST: gi|254348659|gb|GR852338.1|GR852338
genomic: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
EST: AGCTTTGCCAATCCTTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAEST: gi|15664653|gb|BI702024.1|BI702024
genomic: AGCTTTGCCAATCCTT-CTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAA
EST: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGEST: gi|193355864|gb|FK323473.1|FK323473
genomic: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
EST: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGEST: gi|207809104|gb|GD781738.1|GD781738
genomic: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
EST: GCTTTGCCAATCCTTCTGACCTTGCTGGTNCTACTTAAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTEST: gi|6341837|gb|AW164661.1|AW164661
genomic: GCTTTGCCAATCCTTCTGACCTTGCTGGTGCT-CTTAAA-GAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACT
EST: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGEST: gi|207793984|gb|GD763874.1|GD763874
genomic: GAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
EST: CCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATG GTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
genomic: CCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagt ... ttgatttcagGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTCAGAGACAAGCGGACTGGTAAAACAAAAGGTTATGGATTTGTGAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGgttagtcagttcagatgggcctctcttttaagtattactctgtaatgtctaaatacatattgactattactctgcaatatctgttactcttctgactagt
- - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA