1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTGGATCCACAAGGTAGGCTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTgtaagaattcttacatgttttatctttttccccagatcatgataaatgtgtatatagtgcatgccaaactgttgatattgtgccttacacatcttgttta...
species | Glycine max |
transcript | GLYMA07G04200.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCT GCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTGEST: gi|7686636|gb|AW757293.1|AW757293
genomic: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTgtaagaattc ... tcatatgcagGCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTG
EST: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCT GCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTGEST: gi|22927882|gb|BU545021.1|BU545021
genomic: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTgtaagaattc ... tcatatgcagGCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTG
EST: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCT GCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTNNN
genomic: CCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTgtaagaattc ... tcatatgcagGCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGATCCACAAGGTAGGCTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTgtaagaattcttacatgttttatctttttccccagatcatgataaatgtgtatatagtgcatgccaaactgttgatattgtgccttacacatcttgttta
- - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT