1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTTATGTCACAATGTATCTCAATGATTGCCAACGTACAGCTTTCTACGAAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgtgtttgcatttttctataatcaccattcctccattgttattttgtataatcaatatttgtttttatccattctcaattacataatcaattt...
species | Glycine max |
transcript | GLYMA03G27380.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACAAAAGAATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACEST: gi|209726223|gb|BW659575.1|BW659575
genomic: CACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
EST: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACEST: gi|213602652|gb|DB978095.1|DB978095
genomic: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
EST: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACEST: gi|6072317|gb|AW101704.1|AW101704
genomic: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
EST: ATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACEST: gi|151399052|gb|EV268923.1|EV268923
genomic: ATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
EST: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACEST: gi|214007014|gb|DB984688.1|DB984688
genomic: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
EST: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAG ACAAACCGCACAACTGCCCAGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
genomic: AAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgt ... atttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTATGTCACAATGTATCTCAATGATTGCCAACGTACAGCTTTCTACGAAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGgttagtttgtgtttgcatttttctataatcaccattcctccattgttattttgtataatcaatatttgtttttatccattctcaattacataatcaattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcctcc