1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCCCAGAGAATCCACTGGCTCCATTGATTGGGAAGTTGGGACTACCTCTTTACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtatttccttttgatattaaatgatattagttatgtatttctgctgtacttccataattaattggtgactgtagtgtatgcttcaatttatcctttgcttatactgaatggtatatattatcagatacaagtttttctaatagaaattcatcaacttcttgcag
species | Glycine max |
transcript | GLYMA02G45140.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAG CTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAACEST: gi|254324811|gb|GR834236.1|GR834236
genomic: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtat ... cttcttgcagCTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAAC
EST: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAG CTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAEST: gi|15814789|gb|BI787064.1|BI787064
genomic: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtat ... cttcttgcagCTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCA
EST: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAG CTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAACEST: gi|23059794|gb|BU578393.1|BU578393
genomic: TACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtat ... cttcttgcagCTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAAC
EST: CCGTACTAGTGAGTGTATAATTCTGTCCTTTATGACCACGATTTGGAAAG CTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAAC
genomic: CCGTACTAGTGAG-G-ATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtat ... cttcttgcagCTATGCACTTTTTGATATGGATGGGAATCAAGTTCCCCAAGAATTGGTAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCCAGAGAATCCACTGGCTCCATTGATTGGGAAGTTGGGACTACCTCTTTACCGTACTAGTGAGGATAATTCTGTCCTTTATGACCACGATTTGGAAAGgtaaaagtatttccttttgatattaaatgatattagttatgtatttctgctgtacttccataattaattggtgactgtagtgtatgcttcaatttatcctttgcttatactgaatggtatatattatcagatacaagtttttctaatagaaattcatcaacttcttgcag
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