1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCATATAACTCGTGGTGAGTATGACGAAGAGACAAAATATCCGGAGACCAAAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgattttgagactgatattatttgccctgttttttcttaaatggacctaagaaaattgggagcatgggtgaatcataaggaaattaccttttttctt...
species | Glycine max |
transcript | GLYMA02G43610.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAEST: gi|208104058|gb|GD902677.1|GD902677
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACA
EST: GCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|208295744|gb|GE092189.1|GE092189
genomic: GCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: GCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|208061345|gb|GD860095.1|GD860095
genomic: GCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCGG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|120492650|gb|EH220817.1|EH220817
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|193310666|gb|FK276830.1|FK276830
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: ACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|23057396|gb|BU578070.1|BU578070
genomic: ACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|120492293|gb|EH220460.1|EH220460
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|298183964|gb|HO029177.1|HO029177
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|15285030|gb|BI468921.1|BI468921
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGNGAGACCTAGACTCACTGGCAATGCTAEST: gi|6071565|gb|AW100952.1|AW100952
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTA
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|298195454|gb|HO043845.1|HO043845
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACEST: gi|151401932|gb|EV271745.1|EV271745
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGAC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACTTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|24136866|gb|BU927376.1|BU927376
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|13788378|gb|BG650970.1|BG650970
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTCEST: gi|208077466|gb|GD878707.1|GD878707
genomic: AAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
EST: GGGACTATGCCATGGTCATCAG GTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
genomic: GGGACTATGCCATGGTCATCAGgtctgatttt ... gattgtgaagGTTATTCCATGGGGAGACCTAGACTCACTGGCAATGCTACAGAGGCAGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATATAACTCGTGGTGAGTATGACGAAGAGACAAAATATCCGGAGACCAAAACACTAACCATTGGCCAATTTAAGCTGGGACTATGCCATGGTCATCAGgtctgattttgagactgatattatttgccctgttttttcttaaatggacctaagaaaattgggagcatgggtgaatcataaggaaattaccttttttctt
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