1 5' 3' | 2 5' 3' | 3 5' 3' |
TGTTGAGCAAACCTTCTTTAAGTGGGATTCCTATGCTTATTTTGGGTAATAAGATTGACAAACCTGGGGCATTGTCTAAGCAAGACCTGACAGAGCAGATgtaagtatcatgtctaggtgtattagatgttcagatgcacgtagccaagttgggtataatgctgattaaagcaaaagtttgcttaaacatttccataata...
species | Glycine max |
transcript | GLYMA20G27070.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGATTGACAAACCTGGGGCATTGTCTAAGCAAGACCTGACAGAGCAGAT GGGACTGAAATGCATCAATGGTAGAGACGTTTGTTGCTTCATGATCTCCTG
genomic: AAGATTGACAAACCTGGGGCATTGTCTAAGCAAGACCTGACAGAGCAGATgtaagtatca ... atatgtgcagGGGACTGAAATGCATCAATGGTAGAGACGTTTGTTGCTTCATGATCTCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGAGCAAACCTTCTTTAAGTGGGATTCCTATGCTTATTTTGGGTAATAAGATTGACAAACCTGGGGCATTGTCTAAGCAAGACCTGACAGAGCAGATgtaagtatcatgtctaggtgtattagatgttcagatgcacgtagccaagttgggtataatgctgattaaagcaaaagtttgcttaaacatttccataata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT