Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctctctccaccattttctccttcttcctttgctttcacgaagttgtaattgcattaattctgtcatgaatgttctatgaggttctgcttttgttgctcttaggttgtctaaattgttataacaattgatttgttggtaacttgtcttgcagt

Basic information

species Glycine max
transcript GLYMA17G37730.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298196591|gb|HO041334.1|HO041334
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|31474478|gb|CD416506.1|CD416506
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACNAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|120494113|gb|EH222280.1|EH222280
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|208261961|gb|GE057908.1|GE057908
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|151412034|gb|EV281845.1|EV281845
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGATTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|208081831|gb|GD879459.1|GD879459
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCAAAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|16345364|gb|BI970959.1|BI970959
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|12773437|gb|BG238364.1|BG238364
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|12773864|gb|BG238791.1|BG238791
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|298170230|gb|HO018854.1|HO018854
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|298167144|gb|HO010583.1|HO010583
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTCATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|38193189|gb|CF922395.1|CF922395
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|21602650|gb|BQ612981.1|BQ612981
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|8283304|gb|BE020865.1|BE020865
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|6666885|gb|AW278344.1|AW278344
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|7795478|gb|AW780875.1|AW780875
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|15200385|gb|BI424322.1|BI424322
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|31312367|gb|CD397570.1|CD397570
EST:     TNATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATAGCAGGCGATATGCTGGGTTATTTTTCTCA
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATA-CAGGCGATATGCTGGGTTATTTTTCTCA
EST: gi|17519104|gb|BM188146.1|BM188146
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|193460745|gb|FK427514.1|FK427514
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGNGT                         TTCGT-CGCACAAGATAATATACAGG
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGG
EST: gi|4285580|gb|AI440924.1|AI440924
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCT-AC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|20448913|gb|BQ253037.1|BQ253037
EST:     TCATCGGCTCGTCGTATACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|17153474|gb|BM143407.1|BM143407
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|120494291|gb|EH222458.1|EH222458
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|192322713|gb|FK014404.1|FK014404
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|120494235|gb|EH222402.1|EH222402
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|151412841|gb|EV282653.1|EV282653
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|10236137|gb|BE804955.1|BE804955
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|209699340|gb|BW664059.1|BW664059
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|192297663|gb|FG989582.1|FG989582
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|26269345|gb|CA820408.1|CA820408
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|298169760|gb|HO021120.1|HO021120
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|298187150|gb|HO034299.1|HO034299
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|31462386|gb|CD404414.1|CD404414
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
EST: gi|9204083|gb|BE330307.1|BE330307
EST:     TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGT                         TTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC
genomic: TCATCGGCTCGTCGTAAACAGAGACCCTAAATACACAAATTTCGTCGAGGtcagtgctct ... gtcttgcagtTTCGTACGCACAAGATAATATACAGGCGATATGCTGGGTTATTTTTCTCAC