1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTCGCCCATTCGTTCTGAGGAAGGATTAAAGGTTTTACATCCAATTGACCTGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAGgtaaaatttagttgcatctcctcatttatgtcccggccattcttctaacctgtttccctttctaattctttttttatttag
species | Glycine max |
transcript | GLYMA12G35880.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAG GTTGGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCACCTTGGACAATAEST: gi|58020439|gb|CX707181.1|CX707181
genomic: TGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAGgtaaaattta ... ttttatttagGTTGGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCACCTTGGACAATA
EST: TGGACAGGCTTAAATTTGTGGGAGATTCACTAAAGATACTGCGCCAAGAG GTTTGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCACCTTGGACAATA
genomic: TGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAGgtaaaattta ... ttttatttagGTTGGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCACCTTGGACAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCGCCCATTCGTTCTGAGGAAGGATTAAAGGTTTTACATCCAATTGACCTGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAGgtaaaatttagttgcatctcctcatttatgtcccggccattcttctaacctgtttccctttctaattctttttttatttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT