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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCAGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCGgtaatgaaattcattaaatttttatagaacatttgtggttttgttctaagttttatattttgacatatttgtttttggttcattttatatgtcaaaatctattttgttccag

Basic information

species Glycine max
transcript GLYMA09G39370.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254324140|gb|GR836265.1|GR836265
EST:     GTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCG                         ATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
genomic: GTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCGgtaatgaaat ... tttgttccagATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
EST: gi|254327211|gb|GR836820.1|GR836820
EST:     AGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCG                         ATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
genomic: AGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCGgtaatgaaat ... tttgttccagATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
EST: gi|21285429|gb|BQ473300.1|BQ473300
EST:     AGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCG                         ATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
genomic: AGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTCGgtaatgaaat ... tttgttccagATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
EST: gi|16343018|gb|BI968613.1|BI968613
EST:     AATCAAACCTGGAGCCCCATGTTCG                         ATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA
genomic: AATCAAACCTGGAGCCCCATGTTCGgtaatgaaat ... tttgttccagATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCA