1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGTCTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaatagttctcttggctgcacatatggtttatactccaaatcttttccttatgtaccagggcattttaactggttacatactgaaagtctacac...
species | Glycine max |
transcript | GLYMA09G32830.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAG GCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCAEST: gi|7640032|gb|AW734342.1|AW734342
genomic: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaat ... ttcccttcagGCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCA
EST: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAG GCAACACAGGAGAGGTATAANCA-CAAAGGCGCCTATGTTGTCCTTCACCCEST: gi|120494761|gb|EH222928.1|EH222928
genomic: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaat ... ttcccttcagGCAACACAGGAGAGGTATAA-CAACAAAGGCGCCTATGTTGTCCTTCAACC
EST: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAG GCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAAGCAEST: gi|7147219|gb|AW509141.1|AW509141
genomic: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaat ... ttcccttcagGCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCA
EST: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAG GCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCAEST: gi|120495101|gb|EH223268.1|EH223268
genomic: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaat ... ttcccttcagGCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCA
EST: CTGGAAAACTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAG GCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCA
genomic: CTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaat ... ttcccttcagGCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTCTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGgtttgttaatagttctcttggctgcacatatggtttatactccaaatcttttccttatgtaccagggcattttaactggttacatactgaaagtctacac
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