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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGGCTATTTGCTTATTTCCTGTGTACCCTCATCGCTGCAAGCTATTGATACTTTACTCATGTGCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGAgtaaggttttctttcctttaatatttgattgtttttgcctagtttaattaccctctgatatgttgcatgaatatggctttggtactttattaccaacaca...

Basic information

species Glycine max
transcript GLYMA08G45020.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151394490|gb|EV264361.1|EV264361
EST:     ACTTTACTCATGTGCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGA                         TAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT
genomic: ACTTTACTCATGTGCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGAgtaaggtttt ... aatattgtagTAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT
EST: gi|208199190|gb|GD999053.1|GD999053
EST:     GCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGA                         TAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT
genomic: GCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGAgtaaggtttt ... aatattgtagTAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT
EST: gi|151405973|gb|EV275788.1|EV275788
EST:     ACTTTACTCATGTGCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGA                         TAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT
genomic: ACTTTACTCATGTGCCGGGATCCTTTTCCTCATCCTCTCTCTACTCTTGAgtaaggtttt ... aatattgtagTAAGAGGTACAATATTTGGCGCTTTATATATTATTCTTGGAAAGCGAATCT