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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAACACCGGAGTAGTCATGCCACAATCTGCATGTGATGTTATTGgtactaatgcaaatacaatactctgcattaatatatatatatatatatatatatccatttatttgtttaatagtaatttattattttaccaactcatatt...

Basic information

species Glycine max
transcript GLYMA01G41900.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G41900.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv02s0154g00500.t01 (Vitis vinifera), 5'ss of exon 3
GTGAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAACACCGGAGTAGTCATGCCACAATCTGCATGTGATGTTATTGgtactaatgcaaatacaatactctgcattaatatatatatatatatatatatatccatttatttgtttaatagtaatttattattttaccaactcatatt
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GTGAAAACAACGAATCCGAAGAAGTATTGTGTTCGTCCGAATACCGGAATTGTCTTGCCTCGGTCGACATGTGACATCTTAGgtacttacagagatg----attttgttttgggatttttg-gtttttgcaattagtttgtgatttcttta-tatgtttgttttatgctgttgattcag---