1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAAAGCGCTGCTGGAACCTTCCGACGATGATACTCCTCCTCCTACCGCCATGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAAgtgagttactttcttcttcctttcacctttgcttctggagcctctaatattatctcatgaatcgtggttgtag
species | Glycine max |
transcript | GLYMA20G28840.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAA GTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAAEST: gi|207819895|gb|GD793315.1|GD793315
genomic: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAAgtgagttact ... gtggttgtagGTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAA
EST: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAA GTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAAEST: gi|11413359|gb|BF425370.1|BF425370
genomic: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAAgtgagttact ... gtggttgtagGTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAA
EST: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAA GTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAA
genomic: TGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAAgtgagttact ... gtggttgtagGTGAATTTGACTGAACCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGCGCTGCTGGAACCTTCCGACGATGATACTCCTCCTCCTACCGCCATGCACCACCGTAGTCATGCTCCTCCCCCTCCACCTCAACCTCAATCTCAAgtgagttactttcttcttcctttcacctttgcttctggagcctctaatattatctcatgaatcgtggttgtag
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