1 5' 3' | 2 5' 3' |
AATATGATAGAGGTGAGAGTTCCAAATCTTGATTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGgtacactttgcataagcagttcttttagtgttggctttttggggtcgtcctttattttctggaggctatgggttgagtttgtagacatgggccattgcat...
species | Glycine max |
transcript | GLYMA16G31260.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAG GAGTAGATGAGGTGGAAGTTGAAATGGAAGCACAAAAAATAACAGTGAGGGEST: gi|51337453|gb|CO981319.1|CO981319
genomic: TTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGgtacactttg ... tgatatgcagGAGTAGATGAGGTGGAAGTTGAAATGGAAGCACAAAAAATAACAGTGAGGG
EST: TTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAG GAGTAGATGAGGTGGAAGTTGAAATGGAAGCACAAAAAATAACAGTGAGGG
genomic: TTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGgtacactttg ... tgatatgcagGAGTAGATGAGGTGGAAGTTGAAATGGAAGCACAAAAAATAACAGTGAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATATGATAGAGGTGAGAGTTCCAAATCTTGATTGTGAAGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGgtacactttgcataagcagttcttttagtgttggctttttggggtcgtcctttattttctggaggctatgggttgagtttgtagacatgggccattgcat
- - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttggggt